Matt Kaeberlein
Biosketch Information
Email: EMAIL
Lab website: http://www.kaeberleinlab.org
Research in the Kaeberlein Lab is focused on understanding the basic mechanisms of aging and developing therapies for age-associated diseases by targeting the pathways that modulate aging.
Identifying conserved longevity genes
We believe that one effective approach toward developing therapies for age-associated diseases is to focus on evolutionarily conserved longevity factors. The rationale behind this approach is that if a particular gene functions to modulate aging in evolutionarily divergent model organisms, then there is a good chance that this gene will have a similar function in humans. Once these genes are identified, it will be possible to develop drugs specifically targeting the gene(s) of interest. If these drugs increase life span or delay the onset of age-associated disease in mice, they will be good candidates for human clinical trials. We have recently identified 25 homolog pairs that similarly modulate aging in yeast and worms. As part of the Consortium for the Determination of Public Pathways Regulating Longevity, we are vigorously pursuing the identification and validation of additional evolutionarily conserved longevity determinants using yeast, worm, and mouse models.
Molecular mechanisms of dietary restriction
Dietary restriction mimetics represent one of the best bets for rapidly developing therapies that modulate the rate of aging. Dietary restriction (DR, also referred to caloric restriction or calorie restriction, CR) is known to slow aging and delay disease in many different organisms, including yeast, worms, flies, and mice. While it is not yet known whether dietary restriction can increase human life span to the extent observed in laboratory animals, it is very likely that dietary restriction would improve human healthspan and delay a variety of age-related pathologies in people.
The Kaeberlein Lab has several projects aimed toward understanding how DR acts at a genetic and molecular level. By understanding how DR works, we will be able to take a rational approach to developing therapies that mimic dietary restriction. One area of particular interest in our lab is the role that TOR (target of rapamycin) signaling plays in the response to DR. Our group and others have shown that DR reduces TOR signaling, and (like DR) reduced TOR signaling is sufficient to increase life span in yeast, worms, and flies. We are currently studying downstream components of the TOR pathway in order to understand at a molecular level how TOR modulates aging in response to nutrient availability. We are also interested in testing the possibility that chemicals targeting this pathway may act as DR mimetics. One such compound is the TOR inhibitor rapamycin, which we have previously shown can increase life span in simple organisms. Rapamycin is currently being tested for its effects on life span in mice as part of the NIA Interventions Testing Program.
Understanding the relationship between aging and protein homeostasis.
Evidence from work in the Kaeberlein lab and other labs suggests the hypothesis that loss of protein homeostasis plays a causal role in aging. Several age-associated neurodegenerative diseases in people, such as Alzheimer's disease and Huntington's disease, are caused by loss of protein homeostasis due to expression of a toxic protein. We are currently attempting to understand how protein homeostasis changes with age in C. elegans and working to identify novel genetic and pharmacological modifiers of proteotoxicity in nematode models of Huntington's and Alzheimer's diseases. We have reported that DR dramatically delays disease progression in these models and have, thus far, identified more than 50 genes and compounds that have a similar effect. It is our hope that these studies will contribute to the development of effective therapies for treating human diseases of proteotoxicity.
For additional information, please see our website: http://www.kaeberleinlab.org. To download selected publications go to http://www.kaeberleinlab.org/papers.html.
Selected Relevant Publications
- Kaeberlein, M. and Kennedy, B.K. (2008). Hot topics protein translation, 2008. Aging Cell Sept 8.
- Kaeberlein, M. (2008). A molecular age barrier. Nature 454, 709-710.
- Kaeberlein, M. (2008). The ongoing saga of sirtuins and aging. Cell Metab 8, 4-5.
- Smith, E.D., Kaeberlein, T.L., Lydum, B.T., Welton, K.L., Kennedy, B.K., Fox, L.A., and Kaeberlein, M. (2008). Age- and calorie-independent life span extension from dietary restriction by bacterial deprivation in Caenorhabditis elegans. BMC Dev Biol 8, 49.
- Steffen, K.K., MacKay, V.L., Kerr, E.O., Tsuchiya, M., Hu, D., Fox, L.A., Dang, N., Johnston, E.D., Oakes, J.A., Tchao, B.N., Pak, D.N., Fields, S.F., Kennedy, B.K., and Kaeberlein, M. (2008). Yeast life span extension by depletion of 60S ribosomal subunits is mediated by Gcn4. Cell 133, 292-302.
- Effros, R.B., Austad, S., Blau, H., Chesselet, M.F., Ingram, D., Johnson, T.E., Kaeberlein, M., Lundblad, V., McCarter, R., McElhaney, J., and Saag, M. (2008). The biological sciences section program at the 60th annual meeting of the gerontological society of america. J. Gerontol. 63, 331-337.
- Steinkraus, K.A., Smith, E.D., Davis, C., Carr, D., Pendergrass, W.R., Sutphin, G.L., Kennedy, B.K., and Kaeberlein, M. (2008). Dietary restriction suppresses proteotoxicity and enhances longevity by an hsf-1-dependent mechanism in C. elegans. Aging Cell Mar 10; [Epub ahead of print].
- Murakami, C.J., Burtner, C.R., Kennedy, B.K., Kaeberlein, M. (2008) A method for high-throughput quantitative analysis of yeast chronological life span. J. Gerontol. 63, 113-121. Download PDF
- Sutphin, G.L., Kaeberlein M. (2008) Dietary restriction by bacterial deprivation increases life span in wild-derived nematodes. Exp Gerontol. 43, 130-135.
- Schmidlin T., Kaeberlein M., Kudlow B. A., Mackay V., Lockshon D., Kennedy B. K. (2008) Single-gene deletions that restore mating competence to diploid yeast. FEMS Yeast Res. 8, 276-286.
- Kaeberlein M., Kennedy, B. K. (2007) Protein translation, 2007 Aging Cell 6, 731-734.
- Kaeberlein M. (2007) Molecular basis of ageing. EMBO Rep 8, 907-911.
- Kaeberlein M., Kennedy, B. K. (2007). Does resveratrol activate yeast Sir2 in vivo. Aging Cell 6, 415-416.
- Kaeberlein M., Burtner, C. R., Kennedy, B. K. (2007). Recent developments in yeast aging. PLoS Genet 3, e84.
- Kaeberlein M., Powers, R. W. (2007). Sir2 and calorie restriction in yeast: A skeptical perspective. Age Res Rev 6, 128-140.
- Kennedy B. K., Steffen, K. K., Kaeberlein M. (2007). Ruminations on dietary restriction and aging. Cell Mol Life Sci 64, 1323-1328. Kaeberlein M. (2007). Longevity genomics across species. Current Genomics 8, 73-78.
- Lockshon, D., Surface, L. E., Kerr, E. O., Kaeberlein M., Kennedy B. K., (2007). The sensitivity of yeast mutants to oleic acid implicates the peroxisome and other processes in membrane function. Genetics 175, 77-91.
- Smith E. D., Kennedy B. K., Kaeberlein M. (2007). Genome-wide identification of conserved longevity genes in yeast and worms.. Mech Ageing Dev 128, 106-111.
- Kaeberlein T. L. , Smith E. D., Tsuchiya M., Welton K. L., Thomas J. H., Fields S., Kennedy B. K., Kaeberlein M. (2006). Lifespan extension in Caenorhabditis elegans by complete removal of food. Aging Cell 5, 487-494.
- Tsuchiya, M, Dang, N., Kerr, E. O., Hu, D., Steffan, K. K., Oakes, J. A., Kennedy B. K., Kaeberlein M. (2006). Sirtuin-independent effects of nicotinamide on lifespan extension from calorie restriction in yeast.. Aging Cell 5, 505-514.
- Kaeberlein, M., Rabinovitch, P. S. (2006). Grapes versus gluttony. Nature 444, 280-281.
- Kaeberlein, M. (2006). Genome-wide approaches to understanding human aging. Human Genomics 2, 422-428.
- Kaeberlein, M., Steffen, K. K., Hu, D., Dang, N., Kerr, E. O., Tsuchiya, M., Fields, S., and Kennedy, B. K. (2006). Comment on "HST2 mediates SIR2-independent life-span extension by calorie restriction". Science 312, 1312; author reply 1312.
- Powers, R. W., 3rd, Kaeberlein, M., Caldwell, S. D., Kennedy, B. K., and Fields, S. (2006). Extension of chronological life span in yeast by decreased TOR pathway signaling. Genes Dev 20, 174-184.
- Kaeberlein, M., Hu, D., Kerr, E. O., Tsuchiya, M., Westman, E. A., Dang, N., Fields, S., and Kennedy, B. K. (2006). Author's Reply. PLoS Genet 2, e34.
- Kaeberlein, M. (2006). Application of high-throughput technologies to aging-related research. In Handbook of models for human aging, P. M. Conn, ed. (Boston, Elsevier Press), pp. 207-218.
- Kaeberlein, M. (2006). Longevity and aging in the budding yeast. In Handbook of models for human aging, P. M. Conn, ed. (Boston, Elsevier Press), pp. 109-120.
- Kaeberlein, M., Hu, D., Kerr, E. O., Tsuchiya, M., Westman, E. A., Dang, N., Fields, S., and Kennedy, B. K. (2005). Increased Life Span due to Calorie Restriction in Respiratory-Deficient Yeast. PLoS Genet 1, e69.
- Kennedy, B. K., Smith, E. D., and Kaeberlein, M. (2005). The enigmatic role of Sir2 in aging. Cell 123, 548-550.
- Kaeberlein, M., Powers, R. W., 3rd, Steffen, K. K., Westman, E. A., Hu, D., Dang, N., Kerr, E. O., Kirkland, K. T., Fields, S., and Kennedy, B. K. (2005). Regulation of yeast replicative life span by TOR and Sch9 in response to nutrients. Science 310, 1193-1196.
- Hudson, F. N., Kaeberlein, M., Linford, N., Pritchard, D., Beyer, R. P., and Rabinovitch, P. S., eds. (2005). Microarray analysis of gene expression changes in aging. In Handbook of the Biology of Aging, 6th edn (Academic Press).
- Kaeberlein, M., and Kennedy, B. K. (2005). Large-scale identification in yeast of conserved ageing genes. Mech Ageing Dev 126, 17-21.
- Kaeberlein, M., Kirkland, K. T., Fields, S., and Kennedy, B. K. (2005). Genes determining yeast replicative life span in a long-lived genetic background. Mech Ageing Dev 126, 491-504.
- Kaeberlein, M., McDonagh, T., Heltweg, B., Hixon, J., Westman, E. A., Caldwell, S. D., Napper, A., Curtis, R., DiStefano, P. S., Fields, S., et al. (2005). Substrate-specific activation of sirtuins by resveratrol. J Biol Chem 280, 17038-17045.
- Kaeberlein, M., Kirkland, K. T., Fields, S., and Kennedy, B. K. (2004). Sir2-independent life span extension by calorie restriction in yeast. PLoS Biol 2, E296. Download PDF
- Kaeberlein, M. (2004). Aging-related research in the "-omics" age. Sci Aging Knowledge Environ 2004, pe39.
